IL_30QZ_044

3D structure

PDB id

30QZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome with peptidyl-tRNA and Hsp15

Experimental method

ELECTRON MICROSCOPY

Resolution

2.23 Å

Loop

Sequence

AUAAGUAA*UGAAAUU

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

30QZ|1|a|A|1262
30QZ|1|a|U|1263
30QZ|1|a|A|1264
30QZ|1|a|A|1265
30QZ|1|a|G|1266
30QZ|1|a|U|1267
30QZ|1|a|A|1268
30QZ|1|a|A|1269
*
30QZ|1|a|U|2011
30QZ|1|a|G|2012
30QZ|1|a|A|2013
30QZ|1|a|A|2014
30QZ|1|a|A|2015
30QZ|1|a|U|2016
30QZ|1|a|U|2017

Current chains

Chain a

23S rRNA

Nearby chains

Chain e

Large ribosomal subunit protein uL4

Chain r

Large ribosomal subunit protein uL22

Chain z

Large ribosomal subunit protein bL32