IL_30QZ_052

3D structure

PDB id

30QZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome with peptidyl-tRNA and Hsp15

Experimental method

ELECTRON MICROSCOPY

Resolution

2.23 Å

Loop

Sequence

CUAU*AAAUG

Length

9 nucleotides

Bulged bases

30QZ|1|a|U|1554

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_30QZ_052 not in the Motif Atlas

Homologous match to IL_7A0S_053

Geometric discrepancy: 0.1357

The information below is about IL_7A0S_053

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_74317.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

8

Unit IDs

30QZ|1|a|C|1437
30QZ|1|a|U|1438
30QZ|1|a|A|1439
30QZ|1|a|U|1440
*
30QZ|1|a|A|1551
30QZ|1|a|A|1552
30QZ|1|a|A|1553
30QZ|1|a|U|1554
30QZ|1|a|G|1555

Current chains

Chain a

23S rRNA

Nearby chains