IL_30RA_112
3D structure
- PDB id
- 30RA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with peptidyl-tRNA, mRNA and Hsp15
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- CGAGG*CGUAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_30RA_112 not in the Motif Atlas
- Homologous match to IL_7A0S_049
- Geometric discrepancy: 0.2503
- The information below is about IL_7A0S_049
- Detailed Annotation
- tSH-tWH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_05821.3
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 19
Unit IDs
30RA|1|a|C|1357
30RA|1|a|G|1358
30RA|1|a|A|1359
30RA|1|a|G|1360
30RA|1|a|G|1361
*
30RA|1|a|C|1370
30RA|1|a|G|1371
30RA|1|a|U|1372
30RA|1|a|A|1373
30RA|1|a|G|1374
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 1
- Large ribosomal subunit protein bL34
- Chain c
- Large ribosomal subunit protein uL2
Coloring options: