IL_30RA_132

3D structure

PDB id

30RA (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with peptidyl-tRNA, mRNA and Hsp15

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

UGCAAAC*GGACGUAUA

Length

16 nucleotides

Bulged bases

30RA|1|a|A|1801, 30RA|1|a|C|1816, 30RA|1|a|U|1820

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

30RA|1|a|U|1798
30RA|1|a|G|1799
30RA|1|a|C|1800
30RA|1|a|A|1801
30RA|1|a|A|1802
30RA|1|a|A|1803
30RA|1|a|C|1804
*
30RA|1|a|G|1813
30RA|1|a|G|1814
30RA|1|a|A|1815
30RA|1|a|C|1816
30RA|1|a|G|1817
30RA|1|a|U|1818
30RA|1|a|A|1819
30RA|1|a|U|1820
30RA|1|a|A|1821

Current chains

Chain a

23S rRNA

Nearby chains

Chain A

Small subunit ribosomal RNA; SSU rRNA

Chain c

Large ribosomal subunit protein uL2