IL_30RB_125

3D structure

PDB id

30RB (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with peptidyl-tRNA and Hsp15

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

UGCAAAC*GGACGUAUA

Length

16 nucleotides

Bulged bases

30RB|1|a|A|1801, 30RB|1|a|C|1816, 30RB|1|a|U|1820

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

30RB|1|a|U|1798
30RB|1|a|G|1799
30RB|1|a|C|1800
30RB|1|a|A|1801
30RB|1|a|A|1802
30RB|1|a|A|1803
30RB|1|a|C|1804
*
30RB|1|a|G|1813
30RB|1|a|G|1814
30RB|1|a|A|1815
30RB|1|a|C|1816
30RB|1|a|G|1817
30RB|1|a|U|1818
30RB|1|a|A|1819
30RB|1|a|U|1820
30RB|1|a|A|1821

Current chains

Chain a

23S rRNA

Nearby chains

Chain A

Small subunit ribosomal RNA; SSU rRNA

Chain c

Large ribosomal subunit protein uL2