IL_3B5F_001
3D structure
- PDB id
- 3B5F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of a Minimally Hinged Hairpin Ribozyme Incorporating the Ade38Dap Mutation and a 2',5' Phosphodiester Linkage at the Active Site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- CAGUCC*GAGAAG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_26321.2
- Basepair signature
- cWW-tSH-R-tHS-tHS-bif-cWW
- Number of instances in this motif group
- 6
Unit IDs
3B5F|1|A|C|4
3B5F|1|A|A|5
3B5F|1|A|G|6
3B5F|1|A|U|7
3B5F|1|A|C|8
3B5F|1|A|C|9
*
3B5F|1|B|G|6
3B5F|1|B|A|7
3B5F|1|B|G|8
3B5F|1|B|A|9
3B5F|1|B|A|10
3B5F|1|B|G|11
Current chains
- Chain A
- Loop A Substrate strand
- Chain B
- 29-mer Loop A and Loop B Ribozyme strand
Nearby chains
- Chain C
- Loop B S-turn strand
Coloring options: