IL_3BBX_006
3D structure
- PDB id
- 3BBX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 10 Å
Loop
- Sequence
- GUGGAUG*CUGAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3BBX_006 not in the Motif Atlas
- Homologous match to IL_5J7L_245
- Geometric discrepancy: 0.0955
- The information below is about IL_5J7L_245
- Detailed Annotation
- Triple sheared with non-canonical cWW
- Broad Annotation
- Triple sheared
- Motif group
- IL_04021.2
- Basepair signature
- cWW-L-R-tSH-tSH-tHS-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
3BBX|1|B|G|24
3BBX|1|B|U|25
3BBX|1|B|G|26
3BBX|1|B|G|27
3BBX|1|B|A|28
3BBX|1|B|U|29
3BBX|1|B|G|30
*
3BBX|1|B|C|510
3BBX|1|B|U|511
3BBX|1|B|G|512
3BBX|1|B|A|513
3BBX|1|B|A|514
3BBX|1|B|A|515
3BBX|1|B|C|516
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain 0
- 50S ribosomal protein L32
- Chain Q
- 50S ribosomal protein L20
- Chain S
- 50S ribosomal protein L22
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