IL_3BBX_011
3D structure
- PDB id
- 3BBX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 10 Å
Loop
- Sequence
- GGAACUG*CUAAGUAC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3BBX_011 not in the Motif Atlas
- Geometric match to IL_5J7L_250
- Geometric discrepancy: 0.0754
- The information below is about IL_5J7L_250
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.10
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
3BBX|1|B|G|188
3BBX|1|B|G|189
3BBX|1|B|A|190
3BBX|1|B|A|191
3BBX|1|B|C|192
3BBX|1|B|U|193
3BBX|1|B|G|194
*
3BBX|1|B|C|201
3BBX|1|B|U|202
3BBX|1|B|A|203
3BBX|1|B|A|204
3BBX|1|B|G|205
3BBX|1|B|U|206
3BBX|1|B|A|207
3BBX|1|B|C|208
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain 2
- 50S ribosomal protein L34
- Chain E
- 50S ribosomal protein L4
- Chain L
- 50S ribosomal protein L15
- Chain Z
- 50S ribosomal protein L31
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