3D structure

PDB id
3BBX (explore in PDB, NAKB, or RNA 3D Hub)
Description
The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex
Experimental method
ELECTRON MICROSCOPY
Resolution
10 Å

Loop

Sequence
ACG*CUAU
Length
7 nucleotides
Bulged bases
3BBX|1|B|C|2055, 3BBX|1|B|U|2613
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_3BBX_076 not in the Motif Atlas
Homologous match to IL_5J7L_321
Geometric discrepancy: 0.1056
The information below is about IL_5J7L_321
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_83389.2
Basepair signature
cWW-cWW
Number of instances in this motif group
5

Unit IDs

3BBX|1|B|A|2054
3BBX|1|B|C|2055
3BBX|1|B|G|2056
*
3BBX|1|B|C|2612
3BBX|1|B|U|2613
3BBX|1|B|A|2614
3BBX|1|B|U|2615

Current chains

Chain B
23S ribosomal RNA

Nearby chains

Chain 0
50S ribosomal protein L32
Chain S
50S ribosomal protein L22

Coloring options:


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