IL_3BNT_005

3D structure

PDB id

3BNT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site in the Presence of [Co(NH3)6]Cl3 (A1555G mutant, Br-derivative)

Experimental method

X-RAY DIFFRACTION

Resolution

2.3 Å

Loop

Sequence

GCAAG*CACC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_64231.2

Basepair signature

cWW-cWW-cWW-L-cWW-R

Number of instances in this motif group

10

Unit IDs

3BNT|1|A|G|14
3BNT|1|A|C|15
3BNT|1|A|A|16
3BNT|1|A|A|17
3BNT|1|A|G|18
*
3BNT|1|A|C|6||||4_665
3BNT|1|A|A|7||||4_665
3BNT|1|A|C|8||||4_665
3BNT|1|A|C|9||||4_665

Current chains

Chain A

A site of human mitochondrial ribosome

Nearby chains