IL_3CC2_056
3D structure
- PDB id
- 3CC2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The Refined Crystal Structure of the Haloarcula Marismortui Large Ribosomal Subunit at 2.4 Angstrom Resolution with rrnA Sequence for the 23S rRNA and Genome-derived Sequences for r-Proteins
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.4 Å
Loop
- Sequence
- CCAACU*ACGAACG
- Length
- 13 nucleotides
- Bulged bases
- 3CC2|1|0|C|1617
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3CC2_056 not in the Motif Atlas
- Homologous match to IL_4V9F_057
- Geometric discrepancy: 0.0341
- The information below is about IL_4V9F_057
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_34822.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
3CC2|1|0|C|1578
3CC2|1|0|C|1579
3CC2|1|0|A|1580
3CC2|1|0|A|1581
3CC2|1|0|C|1582
3CC2|1|0|U|1583
*
3CC2|1|0|A|1612
3CC2|1|0|C|1613
3CC2|1|0|G|1614
3CC2|1|0|A|1615
3CC2|1|0|A|1616
3CC2|1|0|C|1617
3CC2|1|0|G|1618
Current chains
- Chain 0
- 23S RIBOSOMAL RNA
Nearby chains
No other chains within 10ÅColoring options: