#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6break 7 8 9 10 11 121-122-113-94-95-86-7
1 IL_3PDR_0053PDR0.00000XM-box riboswitch (ykoK leader)A60A61A62A63A64U65*G76C77C78A79A80U81cWWntHSncWWncWW
2 IL_4V9F_0574V9F0.642410 LSU rRNAC1578C1579A1580A1581C1582U1583*A1612C1613G1614A1615A1616G1618cWWtWHtHSncBWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
AAAAAU*GCCAAU1
CCAACU*ACGAACG1
Non-Watson-Crick part of the motif
SequenceCounts
AAAA*CCAA1
CAAC*CGAAC1

Release history

Release3.773.783.793.803.813.823.833.843.853.863.873.883.89
Date2023-12-062024-01-032024-01-032024-01-312024-02-282024-03-272024-04-242024-05-222024-06-192024-07-172024-08-142024-09-112024-10-09
StatusNew id, 2 parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (2)
  • Basepair signature
    cWW-L-R-L-R-L-R-L-R-cWW
    Heat map statistics
    Min 0.64 | Avg 0.32 | Max 0.64
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