IL_3CC4_056

3D structure

PDB id

3CC4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Co-crystal Structure of Anisomycin Bound to the 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

CCAACU*ACGAACG

Length

13 nucleotides

Bulged bases

3CC4|1|0|C|1617

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3CC4_056 not in the Motif Atlas

Homologous match to IL_4V9F_057

Geometric discrepancy: 0.036

The information below is about IL_4V9F_057

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_34822.1

Basepair signature

cWW-L-R-L-R-L-R-L-R-cWW

Number of instances in this motif group

2

Unit IDs

3CC4|1|0|C|1578
3CC4|1|0|C|1579
3CC4|1|0|A|1580
3CC4|1|0|A|1581
3CC4|1|0|C|1582
3CC4|1|0|U|1583
*
3CC4|1|0|A|1612
3CC4|1|0|C|1613
3CC4|1|0|G|1614
3CC4|1|0|A|1615
3CC4|1|0|A|1616
3CC4|1|0|C|1617
3CC4|1|0|G|1618

Current chains

Chain 0

23S ribosomal RNA

Nearby chains