IL_3CC4_057

3D structure

PDB id

3CC4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Co-crystal Structure of Anisomycin Bound to the 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

UGGAAG*CAGGAAG

Length

13 nucleotides

Bulged bases

3CC4|1|0|G|1604

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3CC4_057 not in the Motif Atlas

Homologous match to IL_4V9F_058

Geometric discrepancy: 0.0561

The information below is about IL_4V9F_058

Detailed Annotation

Kink-turn

Broad Annotation

Kink-turn

Motif group

IL_32016.1

Basepair signature

cWW-tSH-tSH-tSS-tHS-L-R-cWW

Number of instances in this motif group

1

Unit IDs

3CC4|1|0|U|1587
3CC4|1|0|G|1588
3CC4|1|0|G|1589
3CC4|1|0|A|1590
3CC4|1|0|A|1591
3CC4|1|0|G|1592
*
3CC4|1|0|C|1602
3CC4|1|0|A|1603
3CC4|1|0|G|1604
3CC4|1|0|G|1605
3CC4|1|0|A|1606
3CC4|1|0|A|1607
3CC4|1|0|G|1608

Current chains

Chain 0

23S ribosomal RNA

Nearby chains

Chain P

50S ribosomal protein L19e

Chain Z

50S ribosomal protein L37Ae