IL_3CC4_070

3D structure

PDB id

3CC4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Co-crystal Structure of Anisomycin Bound to the 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

CGUAGUACCUUG*CUUG

Length

16 nucleotides

Bulged bases

3CC4|1|0|G|1979, 3CC4|1|0|U|1985, 3CC4|1|0|U|2004

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3CC4_070 not in the Motif Atlas

Homologous match to IL_4V9F_071

Geometric discrepancy: 0.0382

The information below is about IL_4V9F_071

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_04332.3

Basepair signature

cWW-L-R-L-cWW-L-L-R-L-R-L

Number of instances in this motif group

2

Unit IDs

3CC4|1|0|C|1975
3CC4|1|0|G|1976
3CC4|1|0|U|1977
3CC4|1|0|A|1978
3CC4|1|0|G|1979
3CC4|1|0|U|1980
3CC4|1|0|A|1981
3CC4|1|0|C|1982
3CC4|1|0|C|1983
3CC4|1|0|U|1984
3CC4|1|0|U|1985
3CC4|1|0|G|1986
*
3CC4|1|0|C|2002
3CC4|1|0|U|2003
3CC4|1|0|U|2004
3CC4|1|0|G|2005

Current chains

Chain 0

23S ribosomal RNA

Nearby chains