IL_3CCE_053

3D structure

PDB id

3CCE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation U2535A

Experimental method

X-RAY DIFFRACTION

Resolution

2.75 Å

Loop

Sequence

CAGUGAAAG*CGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3CCE_053 not in the Motif Atlas

Homologous match to IL_4V9F_054

Geometric discrepancy: 0.115

The information below is about IL_4V9F_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_41853.1

Basepair signature

cWW-L-tHH-L-tHS-L-cWW-L-L

Number of instances in this motif group

1

Unit IDs

3CCE|1|0|C|1521
3CCE|1|0|A|1522
3CCE|1|0|G|1523
3CCE|1|0|U|1524
3CCE|1|0|G|1525
3CCE|1|0|A|1526
3CCE|1|0|A|1527
3CCE|1|0|A|1528
3CCE|1|0|G|1529
*
3CCE|1|0|C|1662
3CCE|1|0|G|1663
3CCE|1|0|A|1664
3CCE|1|0|G|1665

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain A

50S ribosomal protein L2P