Motif IL_41853.1 Version IL_41853.1 of this group appears in releases 3.89 to 3.96
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | break | 10 | 11 | 12 | 13 | 1-13 | 7-12 | 8-11 | 9-10 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4V9F_054 | 4V9F | 0.0000 | 0 | 0 | LSU rRNA | C | 1521 | A | 1522 | G | 1523 | U | 1524 | G | 1525 | A | 1526 | A | 1527 | A | 1528 | G | 1529 | * | C | 1662 | G | 1663 | A | 1664 | G | 1665 | cWW | tHH | tHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAGUGAAAG*CGAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AGUGAAA*GA | 1 |
Release history
| Release | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 |
|---|---|---|---|---|---|---|---|---|
| Date | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 | 2025-04-23 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-L-tHH-L-tHS-L-cWW-L-L
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: