IL_3CCE_062

3D structure

PDB id

3CCE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation U2535A

Experimental method

X-RAY DIFFRACTION

Resolution

2.75 Å

Loop

Sequence

CGUACC*GAAGAAG

Length

13 nucleotides

Bulged bases

3CCE|1|0|G|1777

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3CCE_062 not in the Motif Atlas

Geometric match to IL_4V9F_063

Geometric discrepancy: 0.0495

The information below is about IL_4V9F_063

Detailed Annotation

tSH-tSH-tHH-tHS

Broad Annotation

No text annotation

Motif group

IL_20700.1

Basepair signature

cWW-tSH-L-R-tHH-tHS-cWW

Number of instances in this motif group

10

Unit IDs

3CCE|1|0|C|1764
3CCE|1|0|G|1765
3CCE|1|0|U|1766
3CCE|1|0|A|1767
3CCE|1|0|C|1768
3CCE|1|0|C|1769
*
3CCE|1|0|G|1774
3CCE|1|0|A|1775
3CCE|1|0|A|1776
3CCE|1|0|G|1777
3CCE|1|0|A|1778
3CCE|1|0|A|1779
3CCE|1|0|G|1780

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain P

50S ribosomal protein L19e

Chain Z

50S ribosomal protein L37Ae