IL_3CCE_063

3D structure

PDB id

3CCE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation U2535A

Experimental method

X-RAY DIFFRACTION

Resolution

2.75 Å

Loop

Sequence

CG*CAG

Length

5 nucleotides

Bulged bases

3CCE|1|0|A|2022

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3CCE_063 not in the Motif Atlas

Homologous match to IL_4V9F_064

Geometric discrepancy: 0.0605

The information below is about IL_4V9F_064

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.6

Basepair signature

cWW-L-cWW

Number of instances in this motif group

130

Unit IDs

3CCE|1|0|C|1826
3CCE|1|0|G|1827
*
3CCE|1|0|C|2021
3CCE|1|0|A|2022
3CCE|1|0|G|2023

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain Z

50S ribosomal protein L37Ae