IL_3CCE_099
3D structure
- PDB id
- 3CCE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation U2535A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.75 Å
Loop
- Sequence
- GGUUGCCU*AUAAGC
- Length
- 14 nucleotides
- Bulged bases
- 3CCE|1|9|U|23, 3CCE|1|9|U|24
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3CCE_099 not in the Motif Atlas
- Homologous match to IL_4V9F_102
- Geometric discrepancy: 0.5586
- The information below is about IL_4V9F_102
- Detailed Annotation
- Minor groove platform related
- Broad Annotation
- No text annotation
- Motif group
- IL_67623.1
- Basepair signature
- cWW-tSW-cSW-L-cSW-L-R-L-cWW-cWW
- Number of instances in this motif group
- 1
Unit IDs
3CCE|1|9|G|21
3CCE|1|9|G|22
3CCE|1|9|U|23
3CCE|1|9|U|24
3CCE|1|9|G|25
3CCE|1|9|C|26
3CCE|1|9|C|27
3CCE|1|9|U|28
*
3CCE|1|9|A|54
3CCE|1|9|U|55
3CCE|1|9|A|56
3CCE|1|9|A|57
3CCE|1|9|G|58
3CCE|1|9|C|59
Current chains
- Chain 9
- 5S RIBOSOMAL RNA
Nearby chains
- Chain D
- 50S ribosomal protein L5P
- Chain N
- 50S ribosomal protein L18P
Coloring options: