IL_3CCJ_055

3D structure

PDB id

3CCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation C2534U

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CAGUGAAAG*CGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3CCJ_055 not in the Motif Atlas

Homologous match to IL_4V9F_054

Geometric discrepancy: 0.1733

The information below is about IL_4V9F_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_41853.1

Basepair signature

cWW-L-tHH-L-tHS-L-cWW-L-L

Number of instances in this motif group

1

Unit IDs

3CCJ|1|0|C|1521
3CCJ|1|0|A|1522
3CCJ|1|0|G|1523
3CCJ|1|0|U|1524
3CCJ|1|0|G|1525
3CCJ|1|0|A|1526
3CCJ|1|0|A|1527
3CCJ|1|0|A|1528
3CCJ|1|0|G|1529
*
3CCJ|1|0|C|1662
3CCJ|1|0|G|1663
3CCJ|1|0|A|1664
3CCJ|1|0|G|1665

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains