IL_3CCJ_059

3D structure

PDB id

3CCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation C2534U

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CCAACU*ACGAACG

Length

13 nucleotides

Bulged bases

3CCJ|1|0|C|1617

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3CCJ_059 not in the Motif Atlas

Homologous match to IL_4V9F_057

Geometric discrepancy: 0.0776

The information below is about IL_4V9F_057

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_34822.1

Basepair signature

cWW-L-R-L-R-L-R-L-R-cWW

Number of instances in this motif group

2

Unit IDs

3CCJ|1|0|C|1578
3CCJ|1|0|C|1579
3CCJ|1|0|A|1580
3CCJ|1|0|A|1581
3CCJ|1|0|C|1582
3CCJ|1|0|U|1583
*
3CCJ|1|0|A|1612
3CCJ|1|0|C|1613
3CCJ|1|0|G|1614
3CCJ|1|0|A|1615
3CCJ|1|0|A|1616
3CCJ|1|0|C|1617
3CCJ|1|0|G|1618

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains