IL_3CCJ_074

3D structure

PDB id

3CCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation C2534U

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CGUAGUACCUUG*CUUG

Length

16 nucleotides

Bulged bases

3CCJ|1|0|G|1979, 3CCJ|1|0|U|1985, 3CCJ|1|0|U|2004

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3CCJ_074 not in the Motif Atlas

Geometric match to IL_4V9F_071

Geometric discrepancy: 0.0862

The information below is about IL_4V9F_071

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_04332.3

Basepair signature

cWW-L-R-L-cWW-L-L-R-L-R-L

Number of instances in this motif group

2

Unit IDs

3CCJ|1|0|C|1975
3CCJ|1|0|G|1976
3CCJ|1|0|U|1977
3CCJ|1|0|A|1978
3CCJ|1|0|G|1979
3CCJ|1|0|U|1980
3CCJ|1|0|A|1981
3CCJ|1|0|C|1982
3CCJ|1|0|C|1983
3CCJ|1|0|U|1984
3CCJ|1|0|U|1985
3CCJ|1|0|G|1986
*
3CCJ|1|0|C|2002
3CCJ|1|0|U|2003
3CCJ|1|0|U|2004
3CCJ|1|0|G|2005

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains