IL_3CCM_053

3D structure

PDB id

3CCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2611U

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

CAGUGAAAG*CGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3CCM_053 not in the Motif Atlas

Homologous match to IL_4V9F_054

Geometric discrepancy: 0.129

The information below is about IL_4V9F_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_41853.1

Basepair signature

cWW-L-tHH-L-tHS-L-cWW-L-L

Number of instances in this motif group

1

Unit IDs

3CCM|1|0|C|1521
3CCM|1|0|A|1522
3CCM|1|0|G|1523
3CCM|1|0|U|1524
3CCM|1|0|G|1525
3CCM|1|0|A|1526
3CCM|1|0|A|1527
3CCM|1|0|A|1528
3CCM|1|0|G|1529
*
3CCM|1|0|C|1662
3CCM|1|0|G|1663
3CCM|1|0|A|1664
3CCM|1|0|G|1665

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain A

50S ribosomal protein L2P