IL_3CCM_070

3D structure

PDB id

3CCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2611U

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

CGUAGUACCUUG*CUUG

Length

16 nucleotides

Bulged bases

3CCM|1|0|G|1979, 3CCM|1|0|U|1985, 3CCM|1|0|U|2004

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3CCM_070 not in the Motif Atlas

Geometric match to IL_4V9F_071

Geometric discrepancy: 0.0587

The information below is about IL_4V9F_071

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_04332.3

Basepair signature

cWW-L-R-L-cWW-L-L-R-L-R-L

Number of instances in this motif group

2

Unit IDs

3CCM|1|0|C|1975
3CCM|1|0|G|1976
3CCM|1|0|U|1977
3CCM|1|0|A|1978
3CCM|1|0|G|1979
3CCM|1|0|U|1980
3CCM|1|0|A|1981
3CCM|1|0|C|1982
3CCM|1|0|C|1983
3CCM|1|0|U|1984
3CCM|1|0|U|1985
3CCM|1|0|G|1986
*
3CCM|1|0|C|2002
3CCM|1|0|U|2003
3CCM|1|0|U|2004
3CCM|1|0|G|2005

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains