IL_3CCQ_056

3D structure

PDB id

3CCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation A2488U

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CCAACU*ACGAACG

Length

13 nucleotides

Bulged bases

3CCQ|1|0|C|1617

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3CCQ_056 not in the Motif Atlas

Homologous match to IL_4V9F_057

Geometric discrepancy: 0.0496

The information below is about IL_4V9F_057

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_34822.1

Basepair signature

cWW-L-R-L-R-L-R-L-R-cWW

Number of instances in this motif group

2

Unit IDs

3CCQ|1|0|C|1578
3CCQ|1|0|C|1579
3CCQ|1|0|A|1580
3CCQ|1|0|A|1581
3CCQ|1|0|C|1582
3CCQ|1|0|U|1583
*
3CCQ|1|0|A|1612
3CCQ|1|0|C|1613
3CCQ|1|0|G|1614
3CCQ|1|0|A|1615
3CCQ|1|0|A|1616
3CCQ|1|0|C|1617
3CCQ|1|0|G|1618

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains