IL_3CCQ_057
3D structure
- PDB id
- 3CCQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation A2488U
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- UGGAAG*CAGGAAG
- Length
- 13 nucleotides
- Bulged bases
- 3CCQ|1|0|G|1604
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3CCQ_057 not in the Motif Atlas
- Homologous match to IL_4V9F_058
- Geometric discrepancy: 0.0639
- The information below is about IL_4V9F_058
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_32016.1
- Basepair signature
- cWW-tSH-tSH-tSS-tHS-L-R-cWW
- Number of instances in this motif group
- 1
Unit IDs
3CCQ|1|0|U|1587
3CCQ|1|0|G|1588
3CCQ|1|0|G|1589
3CCQ|1|0|A|1590
3CCQ|1|0|A|1591
3CCQ|1|0|G|1592
*
3CCQ|1|0|C|1602
3CCQ|1|0|A|1603
3CCQ|1|0|G|1604
3CCQ|1|0|G|1605
3CCQ|1|0|A|1606
3CCQ|1|0|A|1607
3CCQ|1|0|G|1608
Current chains
- Chain 0
- 23S RIBOSOMAL RNA
Nearby chains
- Chain P
- 50S ribosomal protein L19e
- Chain Z
- 50S ribosomal protein L37Ae
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