IL_3CCQ_058

3D structure

PDB id

3CCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation A2488U

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GAGCAAC*GGC

Length

10 nucleotides

Bulged bases

3CCQ|1|0|G|1730

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3CCQ_058 not in the Motif Atlas

Homologous match to IL_4V9F_059

Geometric discrepancy: 0.0458

The information below is about IL_4V9F_059

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_12566.4

Basepair signature

cWW-L-tHS-L-cWW-L

Number of instances in this motif group

5

Unit IDs

3CCQ|1|0|G|1728
3CCQ|1|0|A|1729
3CCQ|1|0|G|1730
3CCQ|1|0|C|1731
3CCQ|1|0|A|1732
3CCQ|1|0|A|1733
3CCQ|1|0|C|1734
*
3CCQ|1|0|G|2045
3CCQ|1|0|G|2046
3CCQ|1|0|C|2047

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain B

50S ribosomal protein L3P

Chain R

50S ribosomal protein L22P

Chain X

50S ribosomal protein L31e