IL_3CCQ_089
3D structure
- PDB id
- 3CCQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation A2488U
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- AUAGUAC*GGAACU
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3CCQ_089 not in the Motif Atlas
- Geometric match to IL_4V9F_092
- Geometric discrepancy: 0.0584
- The information below is about IL_4V9F_092
- Detailed Annotation
- Sarcin-Ricin target in LSU H95; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_26307.2
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 9
Unit IDs
3CCQ|1|0|A|2689
3CCQ|1|0|U|2690
3CCQ|1|0|A|2691
3CCQ|1|0|G|2692
3CCQ|1|0|U|2693
3CCQ|1|0|A|2694
3CCQ|1|0|C|2695
*
3CCQ|1|0|G|2700
3CCQ|1|0|G|2701
3CCQ|1|0|A|2702
3CCQ|1|0|A|2703
3CCQ|1|0|C|2704
3CCQ|1|0|U|2705
Current chains
- Chain 0
- 23S RIBOSOMAL RNA
Nearby chains
- Chain B
- 50S ribosomal protein L3P
- Chain E
- 50S ribosomal protein L6P
- Chain K
- 50S ribosomal protein L14P
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