IL_3CCQ_107

3D structure

PDB id

3CCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation A2488U

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GUGA*UACC

Length

8 nucleotides

Bulged bases

3CCQ|1|0|G|1165

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3CCQ_107 not in the Motif Atlas

Homologous match to IL_4V9F_110

Geometric discrepancy: 0.2154

The information below is about IL_4V9F_110

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_92446.2

Basepair signature

cWW-cWW-R-L-L

Number of instances in this motif group

5

Unit IDs

3CCQ|1|0|G|1163
3CCQ|1|0|U|1164
3CCQ|1|0|G|1165
3CCQ|1|0|A|1166
*
3CCQ|1|0|U|1180
3CCQ|1|0|A|1181
3CCQ|1|0|C|1182
3CCQ|1|0|C|1183

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain I

50S ribosomal protein L11P