IL_3CCS_054

3D structure

PDB id

3CCS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2482A

Experimental method

X-RAY DIFFRACTION

Resolution

2.95 Å

Loop

Sequence

GGUCG*UCAAC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3CCS_054 not in the Motif Atlas

Homologous match to IL_4V9F_055

Geometric discrepancy: 0.0554

The information below is about IL_4V9F_055

Detailed Annotation

tSH-tHW-tHS

Broad Annotation

No text annotation

Motif group

IL_17136.7

Basepair signature

cWW-tSH-tHW-tHS-cWW

Number of instances in this motif group

14

Unit IDs

3CCS|1|0|G|1542
3CCS|1|0|G|1543
3CCS|1|0|U|1544
3CCS|1|0|C|1545
3CCS|1|0|G|1546
*
3CCS|1|0|U|1639
3CCS|1|0|C|1640
3CCS|1|0|A|1641
3CCS|1|0|A|1642
3CCS|1|0|C|1643

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain P

50S ribosomal protein L19e