IL_3CCU_093

3D structure

PDB id

3CCU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2482C

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GGUAAG*CGAAAC

Length

12 nucleotides

Bulged bases

3CCU|1|0|A|2800

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3CCU_093 not in the Motif Atlas

Geometric match to IL_5J7L_350

Geometric discrepancy: 0.1692

The information below is about IL_5J7L_350

Detailed Annotation

UAA/GAN with extra cWW

Broad Annotation

No text annotation

Motif group

IL_49767.8

Basepair signature

cWW-cWW-tWH-L-tHS-cWW

Number of instances in this motif group

6

Unit IDs

3CCU|1|0|G|2772
3CCU|1|0|G|2773
3CCU|1|0|U|2774
3CCU|1|0|A|2775
3CCU|1|0|A|2776
3CCU|1|0|G|2777
*
3CCU|1|0|C|2797
3CCU|1|0|G|2798
3CCU|1|0|A|2799
3CCU|1|0|A|2800
3CCU|1|0|A|2801
3CCU|1|0|C|2802

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain E

50S ribosomal protein L6P

Chain J

50S ribosomal protein L13P