IL_3CCV_070

3D structure

PDB id

3CCV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2616A

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CGUAGUACCUUG*CUUG

Length

16 nucleotides

Bulged bases

3CCV|1|0|G|1979, 3CCV|1|0|U|1985, 3CCV|1|0|U|2004

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3CCV_070 not in the Motif Atlas

Homologous match to IL_4V9F_071

Geometric discrepancy: 0.0436

The information below is about IL_4V9F_071

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_04332.3

Basepair signature

cWW-L-R-L-cWW-L-L-R-L-R-L

Number of instances in this motif group

2

Unit IDs

3CCV|1|0|C|1975
3CCV|1|0|G|1976
3CCV|1|0|U|1977
3CCV|1|0|A|1978
3CCV|1|0|G|1979
3CCV|1|0|U|1980
3CCV|1|0|A|1981
3CCV|1|0|C|1982
3CCV|1|0|C|1983
3CCV|1|0|U|1984
3CCV|1|0|U|1985
3CCV|1|0|G|1986
*
3CCV|1|0|C|2002
3CCV|1|0|U|2003
3CCV|1|0|U|2004
3CCV|1|0|G|2005

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains