IL_3CD6_070
3D structure
- PDB id
- 3CD6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Co-cystal of large Ribosomal Subunit mutant G2616A with CC-Puromycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.75 Å
Loop
- Sequence
- CGUAGUACCUUG*CUUG
- Length
- 16 nucleotides
- Bulged bases
- 3CD6|1|0|G|1979, 3CD6|1|0|U|1985, 3CD6|1|0|U|2004
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3CD6_070 not in the Motif Atlas
- Geometric match to IL_4V9F_071
- Geometric discrepancy: 0.0525
- The information below is about IL_4V9F_071
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04332.3
- Basepair signature
- cWW-L-R-L-cWW-L-L-R-L-R-L
- Number of instances in this motif group
- 2
Unit IDs
3CD6|1|0|C|1975
3CD6|1|0|G|1976
3CD6|1|0|U|1977
3CD6|1|0|A|1978
3CD6|1|0|G|1979
3CD6|1|0|U|1980
3CD6|1|0|A|1981
3CD6|1|0|C|1982
3CD6|1|0|C|1983
3CD6|1|0|U|1984
3CD6|1|0|U|1985
3CD6|1|0|G|1986
*
3CD6|1|0|C|2002
3CD6|1|0|U|2003
3CD6|1|0|U|2004
3CD6|1|0|G|2005
Current chains
- Chain 0
- 23S RIBOSOMAL RNA
Nearby chains
- Chain A
- 50S ribosomal protein L2P
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