IL_3CUL_003

3D structure

PDB id

3CUL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Aminoacyl-tRNA synthetase ribozyme

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GG*CGC

Length

5 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3CUL_003 not in the Motif Atlas

Geometric match to IL_2O3X_003

Geometric discrepancy: 0.3355

The information below is about IL_2O3X_003

Detailed Annotation

Decoding loop related

Broad Annotation

Decoding loop related

Motif group

IL_31737.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

12

Unit IDs

3CUL|1|C|G|59
3CUL|1|C|G|61
*
3CUL|1|C|C|85
3CUL|1|C|G|86
3CUL|1|C|C|87

Current chains

Chain C

RNA (92-MER)

Nearby chains