IL_3CUL_004

3D structure

PDB id

3CUL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Aminoacyl-tRNA synthetase ribozyme

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GG*UUC

Length

5 nucleotides

Bulged bases

3CUL|1|D|U|118

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3CUL_004 not in the Motif Atlas

Geometric match to IL_2R8S_004

Geometric discrepancy: 0.3282

The information below is about IL_2R8S_004

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_89505.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

117

Unit IDs

3CUL|1|D|G|101
3CUL|1|D|G|102
*
3CUL|1|D|U|117
3CUL|1|D|U|118
3CUL|1|D|C|119

Current chains

Chain D

RNA (92-MER)

Nearby chains