IL_3CXC_044

3D structure

PDB id

3CXC (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of an enhanced oxazolidinone inhibitor bound to the 50S ribosomal subunit of H. marismortui

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GUGAG*CUACC

Length

10 nucleotides

Bulged bases

3CXC|1|0|G|1165

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3CXC_044 not in the Motif Atlas

Homologous match to IL_4V9F_043

Geometric discrepancy: 0.0954

The information below is about IL_4V9F_043

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_30542.3

Basepair signature

cWW-L-R-L-cWW-L

Number of instances in this motif group

4

Unit IDs

3CXC|1|0|G|1163
3CXC|1|0|U|1164
3CXC|1|0|G|1165
3CXC|1|0|A|1166
3CXC|1|0|G|1167
*
3CXC|1|0|C|1179
3CXC|1|0|U|1180
3CXC|1|0|A|1181
3CXC|1|0|C|1182
3CXC|1|0|C|1183

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains