IL_3CXC_050
3D structure
- PDB id
- 3CXC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of an enhanced oxazolidinone inhibitor bound to the 50S ribosomal subunit of H. marismortui
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GGUU*AC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3CXC_050 not in the Motif Atlas
- Homologous match to IL_4V9F_050
- Geometric discrepancy: 0.0482
- The information below is about IL_4V9F_050
- Detailed Annotation
- Major groove platform; stack outside cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_74641.2
- Basepair signature
- cWW-tSH-cWW-L
- Number of instances in this motif group
- 33
Unit IDs
3CXC|1|0|G|1416
3CXC|1|0|G|1417
3CXC|1|0|U|1418
3CXC|1|0|U|1419
*
3CXC|1|0|A|1678
3CXC|1|0|C|1679
Current chains
- Chain 0
- 23S RIBOSOMAL RNA
Nearby chains
- Chain 1
- RIBOSOMAL PROTEIN L39E
- Chain O
- RIBOSOMAL PROTEIN L19E
- Chain R
- RIBOSOMAL PROTEIN L23
- Chain Z
- RIBOSOMAL PROTEIN L37E
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