IL_3CXC_073

3D structure

PDB id

3CXC (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of an enhanced oxazolidinone inhibitor bound to the 50S ribosomal subunit of H. marismortui

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

AAG*CUAU

Length

7 nucleotides

Bulged bases

3CXC|1|0|A|2096, 3CXC|1|0|U|2648, 3CXC|1|0|A|2649

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3CXC_073 not in the Motif Atlas

Homologous match to IL_4V9F_073

Geometric discrepancy: 0.0781

The information below is about IL_4V9F_073

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_80025.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

8

Unit IDs

3CXC|1|0|A|2095
3CXC|1|0|A|2096
3CXC|1|0|G|2097
*
3CXC|1|0|C|2647
3CXC|1|0|U|2648
3CXC|1|0|A|2649
3CXC|1|0|U|2650

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain B

RIBOSOMAL PROTEIN L3

Chain Q

RIBOSOMAL PROTEIN L22