IL_3D0U_006

3D structure

PDB id

3D0U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Lysine Riboswitch Bound to Lysine

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GGG*CAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_10289.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

237

Unit IDs

3D0U|1|A|G|112
3D0U|1|A|G|113
3D0U|1|A|G|114
*
3D0U|1|A|C|134
3D0U|1|A|A|135
3D0U|1|A|C|136

Current chains

Chain A

Lysine Riboswitch RNA

Nearby chains