IL_3DW6_001

3D structure

PDB id

3DW6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the Sarcin/Ricin Domain from E. COLI 23 S rRNA, U2650-SECH3 modified

Experimental method

X-RAY DIFFRACTION

Resolution

1 Å

Loop

Sequence

C(UMS)C*GAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3DW6_001 not in the Motif Atlas

Geometric match to IL_4WF9_083

Geometric discrepancy: 0.0953

The information below is about IL_4WF9_083

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.5

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

238

Unit IDs

3DW6|1|A|C|2649
3DW6|1|A|UMS|2650
3DW6|1|A|C|2651
*
3DW6|1|A|G|2669
3DW6|1|A|A|2670
3DW6|1|A|G|2671

Current chains

Chain A

Sarcin/Ricin Domain from E. Coli 23 S rRNA

Nearby chains