IL_3EOH_006
3D structure
- PDB id
- 3EOH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Refined group II intron structure
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.12 Å
Loop
- Sequence
- AUAGAGG*UAAAU*U
- Length
- 13 nucleotides
- Bulged bases
- 3EOH|1|A|A|223
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3EOH_006 not in the Motif Atlas
- Geometric match to IL_3IGI_006
- Geometric discrepancy: 0.3393
- The information below is about IL_3IGI_006
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_77045.1
- Basepair signature
- cWW-L-tSW-L-tHW-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
3EOH|1|A|A|149
3EOH|1|A|U|150
3EOH|1|A|A|151
3EOH|1|A|G|153
3EOH|1|A|A|154
3EOH|1|A|G|155
3EOH|1|A|G|156
*
3EOH|1|A|U|221
3EOH|1|A|A|222
3EOH|1|A|A|223
3EOH|1|A|A|224
3EOH|1|A|U|225
*
3EOH|1|A|U|225
Current chains
- Chain A
- Group IIC intron
Nearby chains
- Chain B
- 5'-R(*UP*UP*AP*UP*UP*A)-3'
Coloring options: