IL_3F4H_001

3D structure

PDB id

3F4H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the FMN riboswitch bound to roseoflavin

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

AUC*GAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: AUC,GAU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3F4H_001 not in the Motif Atlas

Geometric match to IL_3SZX_002

Geometric discrepancy: 0.1405

The information below is about IL_3SZX_002

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

214

Unit IDs

3F4H|1|X|A|3
3F4H|1|X|U|4
3F4H|1|X|C|5
*
3F4H|1|Y|G|108
3F4H|1|Y|A|109
3F4H|1|Y|U|110

Current chains

Chain X

FMN riboswitch

Chain Y

FMN riboswitch

Nearby chains