3D structure

PDB id
3G4S (explore in PDB, NAKB, or RNA 3D Hub)
Description
Co-crystal structure of Tiamulin bound to the large ribosomal subunit
Experimental method
X-RAY DIFFRACTION
Resolution
3.2 Å

Loop

Sequence
CGU*GCG
Length
6 nucleotides
Bulged bases
None detected
QA status
Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_3G4S_004 not in the Motif Atlas
Geometric match to IL_4KNQ_003
Geometric discrepancy: 0.1628
The information below is about IL_4KNQ_003
Detailed Annotation
Isolated non-canonical cWW pair
Broad Annotation
No text annotation
Motif group
IL_87907.2
Basepair signature
cWW-cWW-cWW
Number of instances in this motif group
179

Unit IDs

3G4S|1|0|C|53
3G4S|1|0|G|54
3G4S|1|0|U|55
*
3G4S|1|0|G|64
3G4S|1|0|C|65
3G4S|1|0|G|66

Current chains

Chain 0
23S ribosomal RNA

Nearby chains

Chain 1
50S ribosomal protein L37e
Chain 2
50S ribosomal protein L39e
Chain S
50S ribosomal protein L23P
Chain V
50S ribosomal protein L29P

Coloring options:


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