IL_3G4S_014
3D structure
- PDB id
- 3G4S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Co-crystal structure of Tiamulin bound to the large ribosomal subunit
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- CCGACCG*CCAGUACG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3G4S_014 not in the Motif Atlas
- Homologous match to IL_4V9F_012
- Geometric discrepancy: 0.0962
- The information below is about IL_4V9F_012
- Detailed Annotation
- 8x7 Sarcin-Ricin with CC bifurcated pair; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_59724.1
- Basepair signature
- cWW-L-R-L-R-cSH-tWH-tHS-R-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
3G4S|1|0|C|290
3G4S|1|0|C|291
3G4S|1|0|G|292
3G4S|1|0|A|293
3G4S|1|0|C|294
3G4S|1|0|C|295
3G4S|1|0|G|296
*
3G4S|1|0|C|355
3G4S|1|0|C|356
3G4S|1|0|A|357
3G4S|1|0|G|358
3G4S|1|0|U|359
3G4S|1|0|A|360
3G4S|1|0|C|361
3G4S|1|0|G|362
Current chains
- Chain 0
- 23S ribosomal RNA
Nearby chains
- Chain M
- 50S ribosomal protein L15e
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