3D structure

PDB id
3G4S (explore in PDB, NAKB, or RNA 3D Hub)
Description
Co-crystal structure of Tiamulin bound to the large ribosomal subunit
Experimental method
X-RAY DIFFRACTION
Resolution
3.2 Å

Loop

Sequence
CCUAGACAG*CCGAG
Length
14 nucleotides
Bulged bases
3G4S|1|0|A|1150
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_3G4S_045 not in the Motif Atlas
Homologous match to IL_4V9F_042
Geometric discrepancy: 0.0836
The information below is about IL_4V9F_042
Detailed Annotation
Kink-turn
Broad Annotation
No text annotation
Motif group
IL_99692.2
Basepair signature
cWW-tSS-tSH-L-R-R-L-cWW-L-L
Number of instances in this motif group
6

Unit IDs

3G4S|1|0|C|1147
3G4S|1|0|C|1148
3G4S|1|0|U|1149
3G4S|1|0|A|1150
3G4S|1|0|G|1151
3G4S|1|0|A|1152
3G4S|1|0|C|1153
3G4S|1|0|A|1154
3G4S|1|0|G|1155
*
3G4S|1|0|C|1212
3G4S|1|0|C|1213
3G4S|1|0|G|1214
3G4S|1|0|A|1215
3G4S|1|0|G|1216

Current chains

Chain 0
23S ribosomal RNA

Nearby chains

Chain E
50S ribosomal protein L6P
Chain G
50S ribosomal protein L10

Coloring options:


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