IL_3G4S_059

3D structure

PDB id

3G4S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Co-crystal structure of Tiamulin bound to the large ribosomal subunit

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CCAACU*ACGAACG

Length

13 nucleotides

Bulged bases

3G4S|1|0|C|1617

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3G4S_059 not in the Motif Atlas

Homologous match to IL_4V9F_057

Geometric discrepancy: 0.096

The information below is about IL_4V9F_057

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_34822.1

Basepair signature

cWW-L-R-L-R-L-R-L-R-cWW

Number of instances in this motif group

2

Unit IDs

3G4S|1|0|C|1578
3G4S|1|0|C|1579
3G4S|1|0|A|1580
3G4S|1|0|A|1581
3G4S|1|0|C|1582
3G4S|1|0|U|1583
*
3G4S|1|0|A|1612
3G4S|1|0|C|1613
3G4S|1|0|G|1614
3G4S|1|0|A|1615
3G4S|1|0|A|1616
3G4S|1|0|C|1617
3G4S|1|0|G|1618

Current chains

Chain 0

23S ribosomal RNA

Nearby chains