IL_3G4S_073

3D structure

PDB id

3G4S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Co-crystal structure of Tiamulin bound to the large ribosomal subunit

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CGUAGUACCUUG*CUUG

Length

16 nucleotides

Bulged bases

3G4S|1|0|G|1979, 3G4S|1|0|U|1985, 3G4S|1|0|U|2004

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3G4S_073 not in the Motif Atlas

Homologous match to IL_4V9F_071

Geometric discrepancy: 0.0818

The information below is about IL_4V9F_071

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_04332.3

Basepair signature

cWW-L-R-L-cWW-L-L-R-L-R-L

Number of instances in this motif group

2

Unit IDs

3G4S|1|0|C|1975
3G4S|1|0|G|1976
3G4S|1|0|U|1977
3G4S|1|0|A|1978
3G4S|1|0|G|1979
3G4S|1|0|U|1980
3G4S|1|0|A|1981
3G4S|1|0|C|1982
3G4S|1|0|C|1983
3G4S|1|0|U|1984
3G4S|1|0|U|1985
3G4S|1|0|G|1986
*
3G4S|1|0|C|2002
3G4S|1|0|U|2003
3G4S|1|0|U|2004
3G4S|1|0|G|2005

Current chains

Chain 0

23S ribosomal RNA

Nearby chains