IL_3G6E_018
3D structure
- PDB id
- 3G6E (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Co-crystal structure of Homoharringtonine bound to the large ribosomal subunit
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- ACGAAU*AGACU
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3G6E_018 not in the Motif Atlas
- Geometric match to IL_4V9F_018
- Geometric discrepancy: 0.0608
- The information below is about IL_4V9F_018
- Detailed Annotation
- Triple sheared related
- Broad Annotation
- Triple sheared
- Motif group
- IL_67427.1
- Basepair signature
- cWW-cWW-L-R-L-R-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
3G6E|1|0|A|562
3G6E|1|0|C|563
3G6E|1|0|G|564
3G6E|1|0|A|565
3G6E|1|0|A|566
3G6E|1|0|U|567
*
3G6E|1|0|A|591
3G6E|1|0|G|592
3G6E|1|0|A|593
3G6E|1|0|C|594
3G6E|1|0|U|595
Current chains
- Chain 0
- 23S ribosomal RNA
Nearby chains
- Chain W
- 50S ribosomal protein L30P
- Chain Y
- 50S ribosomal protein L32e
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