IL_3G6E_056
3D structure
- PDB id
- 3G6E (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Co-crystal structure of Homoharringtonine bound to the large ribosomal subunit
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- CCAACU*ACGAACG
- Length
- 13 nucleotides
- Bulged bases
- 3G6E|1|0|C|1617
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3G6E_056 not in the Motif Atlas
- Homologous match to IL_4V9F_057
- Geometric discrepancy: 0.0454
- The information below is about IL_4V9F_057
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_34822.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
3G6E|1|0|C|1578
3G6E|1|0|C|1579
3G6E|1|0|A|1580
3G6E|1|0|A|1581
3G6E|1|0|C|1582
3G6E|1|0|U|1583
*
3G6E|1|0|A|1612
3G6E|1|0|C|1613
3G6E|1|0|G|1614
3G6E|1|0|A|1615
3G6E|1|0|A|1616
3G6E|1|0|C|1617
3G6E|1|0|G|1618
Current chains
- Chain 0
- 23S ribosomal RNA
Nearby chains
- Chain Z
- 50S ribosomal protein L37Ae
Coloring options: